Monthly Archive for September, 2011

The New Generation of Microbe Hunters

Photo by Annie Tritt for The New York Times

By Gina Kolata from The New York Times

It was Tuesday evening, June 7. A frightening outbreak of food-borne bacteria was killing dozens of people in Germany and sickening hundreds. And the five doctors having dinner at Da Marco Cucina e Vino, a restaurant in Houston, could not stop talking about it.

What would they do if something like that happened in Houston? Suppose a patient came in, dying of a rapidly progressing infection of unknown origin? How could they figure out the cause and prevent an epidemic? They talked for hours, finally agreeing on a strategy.

That night one of the doctors, James M. Musser, chairman of pathology and genomic medicine at the Methodist Hospital System, heard from a worried resident. A patient had just died from what looked like inhalation anthrax. What should she do?

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Fermilab poised to hit the off switch: With accelerator’s shutdown, lab will go from key quarterback to lowly lineman for particle physics

Tevatron ring ( Chuck Berman, Chicago Tribune / September 28, 2011 )

By Ted Gregory from Chicago Tribune

The wisecrack circulating at less than light speed around Fermilab’s Batavia campus is that by 2 p.m. Friday, this destination for particle physicists won’t be as sexy as it once was.
What has made many scientists’ hearts thump is the Tevatron accelerator — an underground loop that accelerates protons for the head-on collisions that have provided breakthrough science. But the “600-pound gorilla” of high-energy physics will power down after a run of more than two decades.
The historic event will last about 30 minutes. And when it’s over and the last particle makes its way around the accelerator’s 4-mile ring, the laboratory, one scientist lamented, will go from being the quarterback of the global physics football team to grinding away as a lineman.

 

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Scientists’ Nightstand: Patricia Churchland

Photo of Patricia Churchland

By Greg Ross from American Scientist

Patricia Churchland is professor of philosophy at the University of California, San Diego. Her most recent book is Braintrust: What Neuroscience Tells us about Morality (Princeton University Press, 2011).

Could you tell us a bit about yourself?

I work at the interface of philosophy and neuroscience. I call this endeavor “neurophilosophy,” and in 1986 I published a book with MIT Press by that name. My aim is to explore how developments in neuroscience bear upon traditional philosophical questions, such as: What is the self? Where do values come from? How does the brain cause consciousness? Owing to the tremendous growth in neuroscience, neurophilosophy has now become a flourishing subfield. The crux of my hypothesis is that neuroscience tells us some essential things about the basic platform for morality, but that there is much that arises from problem-solving in a social context, where solutions become social practices that become part of culture.

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Brain Navigation Research Team turns Terabytes of Image Data into Model of Neural Circuits

Photo by Eliza Grinnell/SEAS

By Sarah Zhang, SEAS Correspondent from Harvard Gazette

The brain of a mouse measures only 1 cubic centimeter in volume. But when neuroscientists at Harvard’s Center for Brain Science slice it thinly and take high-resolution micrographs of each slice, that tiny brain turns into an exabyte of image data. That’s 1018 bytes, equivalent to more than a billion CDs.What can you do with such a gigantic, unwieldy data set? That’s the latest challenge for Hanspeter Pfister, the Gordon McKay Professor of the Practice of Computer Science at Harvard’s School of Engineering and Applied Sciences (SEAS).

Pfister, an expert in high-performance computing and visualization, is part of an interdisciplinary team collaborating on the Connectome Project at the Center for Brain Science. The project aims to create a wiring diagram of all the neurons in the brain. Neuroscientists have developed innovative techniques for automatically imaging slices of mouse brain, yielding terabytes of data so far.

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How Many Species Are There on Earth and in the Ocean?

By Camilo Mora, Derek P. Tittensor, Sina Adl, Alastair, G.B Simpson and Boris Worm from PLOS Biology

The diversity of life is one of the most striking aspects of our planet; hence knowing how many species inhabit Earth is among the most fundamental questions in science. Yet the answer to this question remains enigmatic, as efforts to sample the world’s biodiversity to date have been limited and thus have precluded direct quantification of global species richness, and because indirect estimates rely on assumptions that have proven highly controversial. Here we show that the higher taxonomic classification of species (i.e., the assignment of species to phylum, class, order, family, and genus) follows a consistent and predictable pattern from which the total number of species in a taxonomic group can be estimated. This approach was validated against well-known taxa, and when applied to all domains of life, it predicts ~8.7 million (±1.3 million SE) eukaryotic species globally, of which ~2.2 million (±0.18 million SE) are marine. In spite of 250 years of taxonomic classification and over 1.2 million species already catalogued in a central database, our results suggest that some 86% of existing species on Earth and 91% of species in the ocean still await description. Renewed interest in further exploration and taxonomy is required if this significant gap in our knowledge of life on Earth is to be closed.

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Hello, Is There Anybody out There?

Photo from the AP

By Paul Davies from The Australian

Whether we are alone in the universe is one of the oldest questions humans have pondered.

For most of history, it has belonged squarely in the provinces of religion and philosophy. In recent decades, however, scientists also have been attracted to the problem in increasing numbers. Fifty-one years ago, a young astronomer by the name of Frank Drake began sweeping the skies with a radio telescope in the hope of stumbling across a message from an alien civilisation. Thus began SETI — the Search for Extraterrestrial Intelligence — an ambitious enterprise to survey thousands of sunlike stars in our neighbourhood of the Milky Way galaxy for any signs of artificial radio traffic.

When SETI began in 1960, it was regarded as quixotic at best, crackpot at worst. “A quest of the most adverse odds,” was the way distinguished biologist George Simpson expressed it. The prevailing opinion among scientists was that life was the result of a chemical fluke so improbable it would be unlikely to have happened twice in the observable universe. “Life seems almost a miracle,” wrote Francis Crick, the co-discoverer of the structure of DNA. It was echoed by another Nobel prizewinning biologist, Jacques Monod, in a bleak assessment: “Man at last knows that he is alone in the unfeeling immensity of the universe, out of which he emerged only by chance.”

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Wild at Heart: We see ourselves as standing above the rest of creation, but could animals be shaping us just as we are shaping them?

By Stephen Cave the Financial Times

Oh victorious cow! In its bid for world domination this cunning ungulate has succeeded in training a great army of apes to do its bidding. These slavish primates, so reliant on the gifts of the udder, first killed off the cows’ predators, such as wolves and bears, and even exterminated those other large herbivores, mastodons and mammoths, that once offered competition for the best grasslands. Now the apes are clearing the world’s ancient forests and turning them over to pasture where their bovine masters might graze. They act as if mesmerised by those big wet eyes.In return for these services a certain sacrifice is made: some cows must be willing to die for the good of their kin. This is the price of power over the primates, who have become addicted to the meat and milk the cows provide. Thanks to this blood pact, the world cattle population has risen to well over a billion, and their dominion is rapidly spreading. But for those pesky vegetarians, their victory would be secure.

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Fourth International Conference on Science in Society

The 2012 Science in Society will be held at University of California, Berkeley, USA from 17 to 19 November 2012.

Call for Papers

If you intend to present a paper at the conference, your participation begins with submission of a paper proposal. For information on proposals, presentation types, and other options, see:  http://science-society.com/conference-2012/call-for-papers . To submit a proposal, see: http://science-society.com/conference-2012/call-for-papers/. Please note that if your proposal is accepted, you will then need to register for the conference.

Registration

Those who submit paper proposals should register following the acceptance of the proposal. Conference delegates who do not intend to present may register at any time. For registration options or to register for the 2012 Science in Society Conference, see: http://science-society.com/conference-2012/register/.

Themes

Back to the Red Planet: Mapping Mars and imagining life there

Photo by fotographic1980

By Andrew H. Knoll from The Sunday Times

When Earth was thought to lie at the centre of the universe, the planets were seen as wandering stars – Gods perhaps, or their distant abodes. Once Copernicus, Galileo and Kepler redrew the solar system, however, Earth became the paradigm for planetary interpretation. Now it became possible to ask whether Mars and other wanderers might have mountains and oceans, and whether they might support life, even civilizations. Indeed, as Earth was the model, intelligence was more or less the expectation for alien life. A verse in Milton’s Paradise Lost captures this new perspective well, “Witness this new-made World . . . with stars numerous, and every star perhaps a world of destined habitation”.

Scientific mapping of Mars began around 1840. By 1877, Nathaniel Green, a British astronomer, had produced a lovely set of maps compiled from the observations of many colleagues. Green’s painterly embrace of diffuse lines and pastel shades – darker in the northern hemisphere and lighter in the south, with white caps at the poles – communicates clearly the limits of nineteenth-century observation. Within a year, however, Green’s masterpiece had been eclipsed by a new map from the Italian astronomer Giovanni Schiaparelli. Where Green had artfully conveyed uncertainty, Schiaparelli drew a sharply detailed landscape dissected by broad “canali”, or channels.

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Recently Published: Science in Society Journal

science_frontThe latest issue  of The International Journal of Science in Society includes: